Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | DW935_16920 | Not Available | Negative | 3940029 - 3941360 | 50523.9 |
| sigma-54-dependent fis family transcriptional regulator | DW935_16925 | Not Available | Negative | 3941357 - 3942724 | 51905.1 |
| sel1 repeat family protein | DW935_16930 | Not Available | Positive | 3942948 - 3943871 | 34894.5 |
| tolc family protein | DW935_16935 | Not Available | Positive | 3943919 - 3945388 | 55841.3 |
| hlyd family efflux transporter periplasmic adaptor subunit | DW935_16940 | Not Available | Positive | 3945473 - 3946723 | 48109.4 |
| abc transporter permease | DW935_16945 | Not Available | Positive | 3946734 - 3949130 | 92726.7 |
| abc transporter permease | DW935_16950 | Not Available | Positive | 3949144 - 3951513 | 90110.9 |
| abc transporter permease | DW935_16955 | Not Available | Positive | 3951534 - 3953933 | 91388.6 |
| abc transporter atp-binding protein | DW935_16960 | Not Available | Positive | 3953953 - 3954627 | 24839.1 |
| abc transporter permease | DW935_16965 | Not Available | Positive | 3954687 - 3957038 | 89900.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

