Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4852 domain-containing protein | DW935_16865 | Not Available | Negative | 3931579 - 3932733 | 43601.4 |
| hypothetical protein | DW935_16870 | Not Available | Negative | 3932735 - 3932965 | 8574.12 |
| hypothetical protein | DW935_16875 | Not Available | Negative | 3932967 - 3933038 | 2708.66 |
| duf4377 domain-containing protein | DW935_16880 | Not Available | Negative | 3933237 - 3934100 | 33881.4 |
| hypothetical protein | DW935_16885 | Not Available | Positive | 3934237 - 3934680 | 17350.2 |
| hypothetical protein | DW935_16890 | Not Available | Negative | 3934824 - 3935249 | 16635.3 |
| hypothetical protein | DW935_16895 | Not Available | Positive | 3936488 - 3936760 | 10397.5 |
| rpn family recombination-promoting nuclease/putative transposase | DW935_16900 | Not Available | Positive | 3936842 - 3937720 | 33913.3 |
| hypothetical protein | DW935_16910 | Not Available | Negative | 3938394 - 3939716 | 51060.5 |
| Trna-pro | Not Available | Not Available | Positive | 3939791 - 3939868 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

