Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DW935_16805 | Not Available | Negative | 3918195 - 3921581 | 126580.0 |
| fecr family protein | DW935_16810 | Not Available | Negative | 3921835 - 3922848 | 38548.0 |
| rna polymerase sigma-70 factor | DW935_16815 | Not Available | Positive | 3922992 - 3923558 | 22251.9 |
| dna-binding protein | DW935_16820 | Not Available | Negative | 3923751 - 3924431 | 25970.1 |
| helicase | DW935_16825 | Not Available | Positive | 3924760 - 3926157 | 53086.0 |
| duf1573 domain-containing protein | DW935_16830 | Not Available | Positive | 3926282 - 3926551 | 10051.0 |
| aaa family atpase | DW935_16835 | Not Available | Negative | 3926740 - 3927513 | 29628.1 |
| hypothetical protein | DW935_16845 | Not Available | Positive | 3928338 - 3928534 | 6906.4 |
| duf134 domain-containing protein | DW935_16850 | Not Available | Negative | 3928788 - 3929597 | 29550.5 |
| hypothetical protein | DW935_16860 | Not Available | Positive | 3931212 - 3931433 | 8438.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

