Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tlpa family protein disulfide reductase | DW935_01355 | Not Available | Negative | 256516 - 258624 | 80265.8 |
| thiol:disulfide interchange protein | DW935_01360 | Not Available | Negative | 258647 - 259837 | 44886.9 |
| hypothetical protein | DW935_01365 | Not Available | Negative | 259868 - 261211 | 51714.6 |
| m56 family peptidase | DW935_01370 | Not Available | Negative | 261222 - 263108 | 70511.9 |
| blai/meci/copy family transcriptional regulator | DW935_01375 | Not Available | Negative | 263142 - 263504 | 14012.8 |
| glucuronyl hydrolase | DW935_01380 | Not Available | Negative | 263715 - 264938 | 46639.4 |
| glycoside hydrolase | DW935_01385 | Not Available | Negative | 264956 - 266605 | 61770.3 |
| alpha-glucosidase | DW935_01390 | Not Available | Negative | 266759 - 268696 | 73607.1 |
| hypothetical protein | DW935_01395 | Not Available | Negative | 268838 - 271474 | 98672.6 |
| serine hydrolase | DW935_01400 | Not Available | Negative | 271481 - 272566 | 39716.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

