Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit l | DW935_16700 | Not Available | Negative | 3891037 - 3892938 | 70360.2 |
| nadh-quinone oxidoreductase subunit nuok | DW935_16705 | Not Available | Negative | 3892941 - 3893249 | 11758.6 |
| nadh-quinone oxidoreductase subunit j | DW935_16710 | Not Available | Negative | 3893255 - 3893758 | 18224.2 |
| nadh-quinone oxidoreductase subunit i | DW935_16715 | Not Available | Negative | 3893774 - 3894226 | 16944.7 |
| nadh-quinone oxidoreductase subunit h | DW935_16720 | Not Available | Negative | 3894226 - 3895302 | 40265.7 |
| nadh-quinone oxidoreductase subunit c/d | DW935_16725 | Not Available | Negative | 3895426 - 3896985 | 59743.6 |
| nadh-quinone oxidoreductase subunit b | DW935_16730 | Not Available | Negative | 3896982 - 3897578 | 22081.9 |
| nadh-quinone oxidoreductase subunit a | DW935_16735 | Not Available | Negative | 3897569 - 3897919 | 13098.5 |
| hypothetical protein | DW935_16740 | Not Available | Negative | 3898023 - 3898400 | 14702.8 |
| trkh family potassium uptake protein | DW935_16745 | Not Available | Negative | 3898503 - 3899957 | 53386.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

