Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase | DW935_16535 | Not Available | Positive | 3847012 - 3849069 | 79334.9 |
| hypothetical protein | DW935_16540 | Not Available | Positive | 3849250 - 3849372 | 4309.2 |
| hypothetical protein | DW935_16545 | Not Available | Negative | 3849449 - 3850327 | 33621.2 |
| hypothetical protein | DW935_16550 | Not Available | Positive | 3850574 - 3851932 | 51108.7 |
| phosphonoacetaldehyde hydrolase | DW935_16555 | Not Available | Positive | 3851975 - 3852763 | 29135.4 |
| 2-aminoethylphosphonate--pyruvate transaminase | DW935_16560 | Not Available | Positive | 3852770 - 3853858 | 40693.9 |
| porin | DW935_16565 | Not Available | Negative | 3853926 - 3855077 | 43038.9 |
| vwa domain-containing protein | DW935_16570 | Not Available | Negative | 3855221 - 3856534 | 51547.8 |
| atpase | DW935_16575 | Not Available | Negative | 3856506 - 3858128 | 62371.6 |
| class i sam-dependent methyltransferase | DW935_16580 | Not Available | Positive | 3858379 - 3859113 | 27872.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

