Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | DW935_16485 | Not Available | Positive | 3830845 - 3831483 | 23832.3 |
| glycine dehydrogenase (aminomethyl-transferring) | DW935_16490 | Not Available | Positive | 3831519 - 3834368 | 105256.0 |
| s9 family peptidase | DW935_16495 | Not Available | Negative | 3834649 - 3837363 | 102691.0 |
| hypothetical protein | DW935_16500 | Not Available | Negative | 3837396 - 3837632 | 8867.62 |
| hypothetical protein | DW935_16505 | Not Available | Positive | 3837756 - 3837983 | 8214.64 |
| formate--tetrahydrofolate ligase | DW935_16510 | Not Available | Negative | 3838015 - 3839682 | 60542.1 |
| iron-containing alcohol dehydrogenase | DW935_16515 | Not Available | Positive | 3839771 - 3840946 | 43343.4 |
| hypothetical protein | DW935_16520 | Not Available | Positive | 3841247 - 3842470 | 48463.2 |
| hypothetical protein | DW935_16525 | Not Available | Positive | 3842476 - 3843057 | 23365.4 |
| atp-binding protein | DW935_16530 | Not Available | Positive | 3843041 - 3846694 | 144642.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

