Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_16385 | Not Available | Negative | 3814640 - 3814867 | 8919.82 |
| hypothetical protein | DW935_16390 | Not Available | Negative | 3815049 - 3815234 | 7334.69 |
| hypothetical protein | DW935_16395 | Not Available | Negative | 3815450 - 3815632 | 6683.63 |
| hypothetical protein | DW935_16400 | Not Available | Negative | 3816006 - 3816251 | 9144.51 |
| duf2693 domain-containing protein | DW935_16405 | Not Available | Negative | 3816263 - 3816589 | 12760.6 |
| hypothetical protein | DW935_16410 | Not Available | Positive | 3816770 - 3817354 | 22039.0 |
| helix-turn-helix transcriptional regulator | DW935_16415 | Not Available | Positive | 3817612 - 3818271 | 24568.5 |
| type i restriction endonuclease subunit r | DW935_16420 | Not Available | Positive | 3818288 - 3819751 | 57642.2 |
| hypothetical protein | DW935_16425 | Not Available | Positive | 3819804 - 3820064 | 9857.48 |
| hypothetical protein | DW935_16430 | Not Available | Negative | 3820191 - 3820373 | 7116.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

