Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sorbitol dehydrogenase | DW935_16275 | Not Available | Positive | 3801554 - 3802573 | 36698.0 |
| naat family transporter | DW935_16280 | Not Available | Negative | 3802646 - 3803290 | 23868.2 |
| hypothetical protein | DW935_16295 | Not Available | Negative | 3803705 - 3803917 | 8567.29 |
| hypothetical protein | DW935_16300 | Not Available | Negative | 3803914 - 3804495 | 22561.7 |
| hypothetical protein | DW935_16305 | Not Available | Negative | 3804470 - 3805483 | 39053.3 |
| dead/deah box helicase | DW935_16310 | Not Available | Negative | 3805488 - 3806660 | 44016.3 |
| hypothetical protein | DW935_16315 | Not Available | Negative | 3806645 - 3807286 | 24992.6 |
| recombinase | DW935_16320 | Not Available | Negative | 3807310 - 3807786 | 18585.8 |
| hypothetical protein | DW935_16325 | Not Available | Negative | 3807940 - 3808677 | 27773.4 |
| hypothetical protein | DW935_16330 | Not Available | Negative | 3808674 - 3809105 | 16917.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

