Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-binding protein | DW935_15960 | Not Available | Positive | 3717124 - 3717369 | 9169.97 |
| beta-n-acetylhexosaminidase | DW935_15965 | Not Available | Negative | 3717553 - 3719874 | 87080.2 |
| dmt family transporter | DW935_15970 | Not Available | Negative | 3719920 - 3720834 | 32976.2 |
| duf1015 domain-containing protein | DW935_15975 | Not Available | Negative | 3721072 - 3722319 | 47087.9 |
| 3-phosphoglycerate dehydrogenase | DW935_15980 | Not Available | Negative | 3722428 - 3723348 | 33087.2 |
| phosphoserine aminotransferase | DW935_15985 | Not Available | Negative | 3723456 - 3724526 | 39557.6 |
| atp-dependent helicase | DW935_15990 | Not Available | Negative | 3724781 - 3726100 | 49651.0 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit f | DW935_15995 | Not Available | Negative | 3726191 - 3727465 | 47059.9 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit e | DW935_16000 | Not Available | Negative | 3727484 - 3728080 | 21276.9 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit d | DW935_16005 | Not Available | Negative | 3728105 - 3728743 | 23121.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

