Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyltransferase | DW935_15910 | Not Available | Positive | 3707478 - 3707933 | 17365.2 |
| class i sam-dependent methyltransferase | DW935_15915 | Not Available | Positive | 3708205 - 3708993 | 29803.5 |
| nudix hydrolase | DW935_15920 | Not Available | Negative | 3709100 - 3709654 | 21545.7 |
| duf5131 family protein | DW935_15925 | Not Available | Positive | 3709860 - 3710627 | 29840.6 |
| sensor protein kdpd | DW935_15930 | Not Available | Positive | 3710807 - 3711934 | 42638.1 |
| pas domain-containing sensor histidine kinase | DW935_15935 | Not Available | Positive | 3711947 - 3713416 | 55121.1 |
| methyltransferase | DW935_15940 | Not Available | Negative | 3713487 - 3714155 | 24548.2 |
| dna recombination protein rmuc | DW935_15945 | Not Available | Negative | 3714173 - 3715408 | 46960.8 |
| cof-type had-iib family hydrolase | DW935_15950 | Not Available | Positive | 3715504 - 3716310 | 30316.9 |
| ferredoxin | DW935_15955 | Not Available | Negative | 3716300 - 3716830 | 19120.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

