Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| k(+)-transporting atpase subunit b | DW935_15860 | Not Available | Positive | 3695008 - 3697041 | 72476.1 |
| k(+)-transporting atpase subunit c | DW935_15865 | Not Available | Positive | 3697055 - 3697624 | 20500.6 |
| hypothetical protein | DW935_15870 | Not Available | Positive | 3697898 - 3698599 | 25515.1 |
| hypothetical protein | DW935_15875 | Not Available | Positive | 3698626 - 3698871 | 9506.55 |
| had family hydrolase | DW935_15880 | Not Available | Negative | 3698868 - 3699557 | 26385.9 |
| chloramphenicol acetyltransferase | DW935_15885 | Not Available | Negative | 3699595 - 3700230 | 24130.8 |
| aspartate kinase | DW935_15890 | Not Available | Negative | 3700640 - 3701986 | 50720.7 |
| bifunctional alpha,alpha-trehalose-phosphate synthase (udp-forming)/trehalose-phosphatase | DW935_15895 | Not Available | Positive | 3702347 - 3704599 | 86564.3 |
| glycoside hydrolase family 15 protein | DW935_15900 | Not Available | Positive | 3704618 - 3706405 | 69821.9 |
| class a beta-lactamase, subclass a2 | DW935_15905 | Not Available | Positive | 3706464 - 3707423 | 36138.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

