Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_15810 | Not Available | Positive | 3685493 - 3685711 | 8234.71 |
| sugar o-acetyltransferase | DW935_15815 | Not Available | Negative | 3685771 - 3686322 | 20072.3 |
| dmt family transporter | DW935_15820 | Not Available | Negative | 3686335 - 3687243 | 34073.1 |
| glycine/betaine abc transporter substrate-binding protein | DW935_15825 | Not Available | Negative | 3687388 - 3688230 | 31666.2 |
| proline/glycine betaine abc transporter permease | DW935_15830 | Not Available | Negative | 3688233 - 3689057 | 29538.8 |
| glycine betaine/l-proline abc transporter atp-binding protein | DW935_15835 | Not Available | Negative | 3689054 - 3690280 | 45636.3 |
| sigma-54-dependent fis family transcriptional regulator | DW935_15840 | Not Available | Positive | 3690582 - 3691919 | 50007.5 |
| o-acetyl-adp-ribose deacetylase | DW935_15845 | Not Available | Negative | 3692267 - 3692893 | 22653.3 |
| potassium-transporting atpase subunit f | DW935_15850 | Not Available | Positive | 3693161 - 3693241 | 3136.13 |
| k+-transporting atpase subunit a | DW935_15855 | Not Available | Positive | 3693268 - 3694974 | 61976.5 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

