Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hu family dna-binding protein | DW935_15760 | Not Available | Negative | 3677861 - 3679291 | 52667.8 |
| hu family dna-binding protein | DW935_15765 | Not Available | Negative | 3679317 - 3679589 | 10202.5 |
| 30s ribosomal protein s12 methylthiotransferase rimo | DW935_15770 | Not Available | Negative | 3679663 - 3680961 | 50090.1 |
| signal recognition particle-docking protein ftsy | DW935_15775 | Not Available | Negative | 3680965 - 3681924 | 34732.9 |
| duf4295 domain-containing protein | DW935_15780 | Not Available | Negative | 3682098 - 3682253 | 5827.19 |
| 50s ribosomal protein l33 | DW935_15785 | Not Available | Negative | 3682263 - 3682451 | 7205.97 |
| 50s ribosomal protein l28 | DW935_15790 | Not Available | Negative | 3682472 - 3682732 | 9789.04 |
| cina family protein | DW935_15795 | Not Available | Negative | 3682837 - 3683337 | 17534.8 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | DW935_15800 | Not Available | Negative | 3683359 - 3684378 | 36941.3 |
| type i methionyl aminopeptidase | DW935_15805 | Not Available | Negative | 3684402 - 3685256 | 31857.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

