Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_01255 | Not Available | Negative | 230610 - 231203 | 22576.8 |
| phosphoribosylformylglycinamidine cyclo-ligase | DW935_01260 | Not Available | Positive | 232440 - 233609 | 42663.2 |
| hypothetical protein | DW935_01265 | Not Available | Positive | 233590 - 233868 | 10749.0 |
| peptide chain release factor 1 | DW935_01270 | Not Available | Positive | 233852 - 234967 | 42032.6 |
| orotidine 5'-phosphate decarboxylase | DW935_01275 | Not Available | Positive | 235004 - 235822 | 30601.6 |
| hd domain-containing protein | DW935_01280 | Not Available | Positive | 235911 - 237146 | 47212.3 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | DW935_01285 | Not Available | Positive | 237279 - 238319 | 36895.4 |
| bifunctional udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase/3-hydroxyacyl-acp dehydratase | DW935_01290 | Not Available | Positive | 238325 - 239710 | 51127.1 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DW935_01295 | Not Available | Positive | 239727 - 240494 | 27740.6 |
| hypothetical protein | DW935_01300 | Not Available | Positive | 240557 - 241120 | 21611.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

