Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cida/lrga family protein | DW935_15660 | Not Available | Negative | 3659416 - 3659769 | 13036.8 |
| phosphate acetyltransferase | DW935_15665 | Not Available | Positive | 3659972 - 3660985 | 35492.5 |
| acetate kinase | DW935_15670 | Not Available | Positive | 3661011 - 3662207 | 42809.0 |
| udp-2,3-diacylglucosamine diphosphatase | DW935_15675 | Not Available | Negative | 3662273 - 3663040 | 29795.7 |
| duf59 domain-containing protein | DW935_15680 | Not Available | Negative | 3663173 - 3663493 | 11973.4 |
| dna repair protein radc | DW935_15685 | Not Available | Negative | 3663530 - 3664219 | 25617.0 |
| glycosyltransferase | DW935_15690 | Not Available | Negative | 3664293 - 3665282 | 37551.6 |
| elongation factor p | DW935_15695 | Not Available | Negative | 3665384 - 3665950 | 21126.5 |
| 50s ribosomal protein l34 | DW935_15700 | Not Available | Positive | 3666153 - 3666308 | 6019.34 |
| universal stress protein | DW935_15705 | Not Available | Negative | 3666557 - 3667684 | 43153.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

