Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hybrid sensor histidine kinase/response regulator | DW935_15610 | Not Available | Positive | 3643970 - 3647968 | 152192.0 |
| duf3810 domain-containing protein | DW935_15615 | Not Available | Negative | 3648186 - 3649226 | 40901.9 |
| duf2264 domain-containing protein | DW935_15620 | Not Available | Negative | 3649368 - 3651683 | 88865.1 |
| neuraminidase | DW935_15625 | Not Available | Negative | 3651775 - 3653049 | 49239.1 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | DW935_15630 | Not Available | Negative | 3653472 - 3654770 | 48437.3 |
| dihydropteroate synthase | DW935_15635 | Not Available | Positive | 3654889 - 3655746 | 32012.9 |
| tigr00159 family protein | DW935_15640 | Not Available | Positive | 3655778 - 3656542 | 28478.5 |
| gnat family n-acetyltransferase | DW935_15645 | Not Available | Negative | 3656620 - 3657630 | 39029.0 |
| duf2156 domain-containing protein | DW935_15650 | Not Available | Negative | 3657614 - 3658516 | 34328.3 |
| lrgb family protein | DW935_15655 | Not Available | Negative | 3658740 - 3659435 | 24440.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

