Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_15510 | Not Available | Negative | 3608544 - 3609182 | 24817.5 |
| hypothetical protein | DW935_15515 | Not Available | Negative | 3609231 - 3609683 | 17226.2 |
| atp-dependent exonuclease | DW935_15520 | Not Available | Negative | 3609732 - 3612815 | 116260.0 |
| exonuclease subunit sbcd | DW935_15525 | Not Available | Negative | 3612812 - 3614014 | 44927.8 |
| hypothetical protein | DW935_15530 | Not Available | Positive | 3614186 - 3614461 | 10421.8 |
| addiction module toxin rele | DW935_15535 | Not Available | Positive | 3614451 - 3614792 | 12875.8 |
| glycosyl hydrolase | DW935_15540 | Not Available | Negative | 3614845 - 3617196 | 88957.2 |
| beta-galactosidase | DW935_15545 | Not Available | Negative | 3617307 - 3619655 | 88315.6 |
| alpha-l-arabinofuranosidase | DW935_15550 | Not Available | Negative | 3619672 - 3622170 | 92428.4 |
| glycoside hydrolase | DW935_15555 | Not Available | Negative | 3622198 - 3624144 | 73440.1 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

