Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate kinase | DW935_15460 | Not Available | Negative | 3599067 - 3599531 | 17401.2 |
| atp-dependent dna helicase recg | DW935_15465 | Not Available | Negative | 3599752 - 3601848 | 79790.1 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | DW935_15470 | Not Available | Negative | 3601850 - 3602509 | 24326.4 |
| dj-1 family protein | DW935_15475 | Not Available | Negative | 3602506 - 3603057 | 19256.6 |
| tonb family protein | DW935_15480 | Not Available | Negative | 3603061 - 3603954 | 31428.5 |
| biopolymer transporter exbd | DW935_15485 | Not Available | Negative | 3603964 - 3604383 | 16032.8 |
| mota/tolq/exbb proton channel family protein | DW935_15490 | Not Available | Negative | 3604390 - 3605103 | 25739.8 |
| pyridoxine 5'-phosphate synthase | DW935_15495 | Not Available | Negative | 3605103 - 3605819 | 26433.6 |
| nad kinase | DW935_15500 | Not Available | Positive | 3605938 - 3606810 | 32172.3 |
| acyloxyacyl hydrolase | DW935_15505 | Not Available | Positive | 3606982 - 3608292 | 49681.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

