Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mota/tolq/exbb proton channel family protein | DW935_15405 | Not Available | Negative | 3588250 - 3589065 | 28918.5 |
| hypothetical protein | DW935_15410 | Not Available | Positive | 3589682 - 3589930 | 9849.92 |
| hypothetical protein | DW935_15415 | Not Available | Positive | 3589960 - 3590547 | 22205.0 |
| transcriptional regulator | DW935_15420 | Not Available | Positive | 3590558 - 3590848 | 10732.2 |
| malate dehydrogenase | DW935_15425 | Not Available | Positive | 3591092 - 3592093 | 36087.5 |
| dna primase | DW935_15430 | Not Available | Positive | 3592171 - 3594246 | 78742.5 |
| gtp cyclohydrolase i fole | DW935_15435 | Not Available | Negative | 3594259 - 3594852 | 22693.7 |
| spor domain-containing protein | DW935_15440 | Not Available | Negative | 3594857 - 3595315 | 17067.7 |
| duf1599 domain-containing protein | DW935_15450 | Not Available | Negative | 3597498 - 3598040 | 20764.0 |
| lysm peptidoglycan-binding domain-containing protein | DW935_15455 | Not Available | Negative | 3598154 - 3599044 | 33332.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

