Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mate family efflux transporter | DW935_15355 | Not Available | Negative | 3578321 - 3579670 | 49721.6 |
| aminopeptidase | DW935_15360 | Not Available | Positive | 3579833 - 3581326 | 55044.0 |
| gntr family transcriptional regulator | DW935_15365 | Not Available | Negative | 3581424 - 3581789 | 14300.2 |
| hypothetical protein | DW935_15370 | Not Available | Negative | 3581786 - 3582676 | 33870.1 |
| atp-binding cassette domain-containing protein | DW935_15375 | Not Available | Negative | 3582691 - 3583533 | 31523.3 |
| tetratricopeptide repeat protein | DW935_15380 | Not Available | Negative | 3583718 - 3585133 | 53313.9 |
| phosphate abc transporter substrate-binding protein | DW935_15385 | Not Available | Negative | 3585157 - 3586098 | 34132.3 |
| energy transducer tonb | DW935_15390 | Not Available | Negative | 3586111 - 3586923 | 30404.8 |
| biopolymer transporter exbd | DW935_15395 | Not Available | Negative | 3586953 - 3587603 | 24262.1 |
| biopolymer transporter exbd | DW935_15400 | Not Available | Negative | 3587616 - 3588221 | 22743.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

