Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| guanylate kinase | DW935_15255 | Not Available | Positive | 3562629 - 3563198 | 21367.4 |
| hypothetical protein | DW935_15260 | Not Available | Positive | 3563203 - 3563385 | 6793.87 |
| nicotinate-nucleotide adenylyltransferase | DW935_15265 | Not Available | Positive | 3563367 - 3563939 | 22162.7 |
| duf3836 domain-containing protein | DW935_15270 | Not Available | Negative | 3564022 - 3564492 | 18198.9 |
| metallophosphoesterase | DW935_15275 | Not Available | Negative | 3564720 - 3565559 | 31352.6 |
| 1,4-dihydroxy-2-naphthoate polyprenyltransferase | DW935_15280 | Not Available | Positive | 3565633 - 3566523 | 32692.7 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | DW935_15285 | Not Available | Negative | 3566574 - 3567056 | 17475.2 |
| faa hydrolase family protein | DW935_15290 | Not Available | Negative | 3567053 - 3567670 | 23340.1 |
| redox-sensing transcriptional repressor rex | DW935_15295 | Not Available | Negative | 3567675 - 3568325 | 24251.6 |
| translation initiation factor | DW935_15300 | Not Available | Positive | 3568443 - 3568781 | 12663.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

