Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpa family phage regulatory protein | DW935_01205 | Not Available | Positive | 221427 - 221696 | 10316.7 |
| hypothetical protein | DW935_01210 | Not Available | Negative | 221823 - 222062 | 9422.84 |
| hypothetical protein | DW935_01215 | Not Available | Positive | 222134 - 222433 | 11718.3 |
| beta-n-acetylhexosaminidase | DW935_01220 | Not Available | Positive | 222938 - 225244 | 85864.2 |
| hypothetical protein | DW935_01225 | Not Available | Negative | 225354 - 225845 | 17873.6 |
| hypothetical protein | DW935_01230 | Not Available | Negative | 225864 - 226085 | 8766.94 |
| carbon starvation protein a | DW935_01235 | Not Available | Negative | 226072 - 227502 | 52243.5 |
| s-layer protein | DW935_01240 | Not Available | Positive | 227581 - 229260 | 64158.6 |
| hypothetical protein | DW935_01245 | Not Available | Positive | 229426 - 229641 | 7928.93 |
| cell filamentation protein fic | DW935_01250 | Not Available | Negative | 229609 - 230607 | 39570.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

