Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM43-4BH
Accession NumberQSFK00000000.1
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_01115 | Not Available | + | 210833 - 211141 | 11304.6 |
| Hypothetical protein | DW935_01120 | Not Available | + | 211153 - 211635 | 18723.4 |
| Internal virion protein d | DW935_01125 | Not Available | + | 211632 - 212036 | 15232.1 |
| hypothetical protein | DW935_01130 | Not Available | + | 212056 - 212568 | 19345.4 |
| hypothetical protein | DW935_01135 | Not Available | + | 212565 - 213113 | 20981.9 |
| lysm domain-containing protein | DW935_01140 | Not Available | + | 213110 - 213388 | 10281.2 |
| Nucleotidyltransferase | DW935_01145 | Not Available | + | 213390 - 214247 | 31277.8 |
| Hypothetical protein | DW935_01150 | Not Available | + | 214231 - 214710 | 18941.9 |
| Attl | Not Available | Not Available | + | 4248875 - 4248886 | Not Available |
| 1_nc_021799: structural protein | DW935_18090 | Not Available | - | 4253698 - 4254234 | 20618.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
