Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DW935_15155 | Not Available | Negative | 3538885 - 3540045 | 41814.0 |
| duf4980 domain-containing protein | DW935_15160 | Not Available | Negative | 3540061 - 3541944 | 70929.3 |
| tonb-dependent receptor | DW935_15165 | Not Available | Negative | 3542093 - 3544411 | 86968.6 |
| dna-binding protein | DW935_15170 | Not Available | Positive | 3545048 - 3545659 | 23004.6 |
| prolipoprotein diacylglyceryl transferase | DW935_15175 | Not Available | Negative | 3545701 - 3546507 | 31284.6 |
| diaminopimelate dehydrogenase | DW935_15180 | Not Available | Negative | 3546614 - 3547513 | 32319.9 |
| holliday junction branch migration protein ruva | DW935_15185 | Not Available | Positive | 3547689 - 3548282 | 21141.8 |
| hypothetical protein | DW935_15190 | Not Available | Negative | 3548370 - 3549194 | 30836.1 |
| hdig domain-containing protein | DW935_15195 | Not Available | Positive | 3549212 - 3550714 | 57599.9 |
| hemolysin iii | DW935_15200 | Not Available | Positive | 3550719 - 3551354 | 23650.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

