Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrofolate reductase | DW935_15005 | Not Available | Negative | 3503575 - 3505587 | 76567.0 |
| arac family transcriptional regulator | DW935_15010 | Not Available | Negative | 3505695 - 3506162 | 18149.8 |
| dna helicase recq | DW935_15015 | Not Available | Positive | 3506494 - 3508311 | 69120.0 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase | DW935_15020 | Not Available | Positive | 3509247 - 3510422 | 43948.3 |
| port family protein | DW935_15025 | Not Available | Negative | 3510524 - 3511195 | 24221.6 |
| port family protein | DW935_15030 | Not Available | Negative | 3511341 - 3511946 | 21310.4 |
| porin family protein | DW935_15035 | Not Available | Negative | 3512150 - 3512686 | 19680.2 |
| hypothetical protein | DW935_15040 | Not Available | Negative | 3512891 - 3513082 | 6973.57 |
| m23 family peptidase | DW935_15045 | Not Available | Negative | 3513086 - 3513709 | 22855.6 |
| hypothetical protein | DW935_15050 | Not Available | Negative | 3513719 - 3514378 | 24397.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

