Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DW935_14945 | Not Available | Negative | 3485925 - 3489245 | 122261.0 |
| fecr family protein | DW935_14950 | Not Available | Negative | 3489495 - 3490508 | 39115.7 |
| rna polymerase sigma-70 factor | DW935_14955 | Not Available | Negative | 3490579 - 3491169 | 23285.1 |
| sgnh/gdsl hydrolase family protein | DW935_14965 | Not Available | Negative | 3493160 - 3494011 | 32535.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DW935_14970 | Not Available | Negative | 3494611 - 3496119 | 56877.3 |
| susc/raga family tonb-linked outer membrane protein | DW935_14975 | Not Available | Negative | 3496141 - 3499362 | 118769.0 |
| hypothetical protein | DW935_14985 | Not Available | Positive | 3500818 - 3501003 | 7393.02 |
| adenylosuccinate synthase | DW935_14990 | Not Available | Negative | 3501088 - 3502359 | 46923.9 |
| transcriptional repressor | DW935_14995 | Not Available | Negative | 3502376 - 3502867 | 19166.0 |
| dna alkylation repair protein | DW935_15000 | Not Available | Negative | 3502898 - 3503566 | 25707.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

