Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family oxidoreductase | DW935_14890 | Not Available | Positive | 3469195 - 3470757 | 58084.8 |
| nitroreductase family protein | DW935_14900 | Not Available | Negative | 3471124 - 3471852 | 27860.2 |
| tolc family protein | DW935_14905 | Not Available | Negative | 3471965 - 3473134 | 43849.7 |
| cusa/czca family heavy metal efflux rnd transporter | DW935_14910 | Not Available | Negative | 3473145 - 3476228 | 112524.0 |
| efflux rnd transporter periplasmic adaptor subunit | DW935_14915 | Not Available | Negative | 3476240 - 3477499 | 45794.5 |
| hypothetical protein | DW935_14920 | Not Available | Negative | 3477594 - 3478097 | 19121.3 |
| m13 family peptidase | DW935_14925 | Not Available | Negative | 3478127 - 3480139 | 74935.9 |
| abc transporter atp-binding protein | DW935_14930 | Not Available | Negative | 3480189 - 3482132 | 73611.2 |
| hypothetical protein | DW935_14935 | Not Available | Negative | 3482529 - 3484205 | 63050.8 |
| ragb/susd family nutrient uptake outer membrane protein | DW935_14940 | Not Available | Negative | 3484223 - 3485911 | 64097.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

