Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron abc transporter permease | DW935_14785 | Not Available | Positive | 3433775 - 3434806 | 36125.7 |
| abc transporter atp-binding protein | DW935_14790 | Not Available | Positive | 3434806 - 3435813 | 37172.9 |
| threonine synthase | DW935_14800 | Not Available | Negative | 3436405 - 3437706 | 47694.8 |
| cofactor-independent phosphoglycerate mutase | DW935_14805 | Not Available | Negative | 3437797 - 3439008 | 44511.4 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | DW935_14810 | Not Available | Negative | 3439013 - 3441445 | 88625.7 |
| dna repair protein rada | DW935_14815 | Not Available | Positive | 3441973 - 3443340 | 49904.5 |
| duf1847 domain-containing protein | DW935_14820 | Not Available | Positive | 3443380 - 3444030 | 24388.4 |
| fad-binding protein | DW935_14825 | Not Available | Positive | 3444036 - 3445679 | 60702.7 |
| luxr family transcriptional regulator | DW935_14830 | Not Available | Positive | 3445807 - 3446427 | 23357.5 |
| tonb-dependent receptor | DW935_14835 | Not Available | Positive | 3446597 - 3449023 | 92160.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

