Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_14685 | Not Available | Negative | 3393541 - 3395541 | 74819.1 |
| duf4968 domain-containing protein | DW935_14690 | Not Available | Negative | 3395559 - 3397943 | 91818.8 |
| glycoside hydrolase family 2 | DW935_14695 | Not Available | Negative | 3397957 - 3401325 | 126805.0 |
| hypothetical protein | DW935_14700 | Not Available | Negative | 3401366 - 3403912 | 95064.9 |
| duf5060 domain-containing protein | DW935_14705 | Not Available | Negative | 3404106 - 3405713 | 61914.5 |
| xylan 1,4-beta-xylosidase | DW935_14710 | Not Available | Negative | 3405751 - 3407250 | 56463.8 |
| ragb/susd family nutrient uptake outer membrane protein | DW935_14715 | Not Available | Negative | 3407559 - 3409523 | 73508.7 |
| tonb-dependent receptor | DW935_14720 | Not Available | Negative | 3409530 - 3412577 | 112611.0 |
| glycoside hydrolase | DW935_14725 | Not Available | Negative | 3412941 - 3414962 | 76135.4 |
| ragb/susd family nutrient uptake outer membrane protein | DW935_14730 | Not Available | Negative | 3415348 - 3417501 | 79983.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

