Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_14630 | Not Available | Negative | 3382685 - 3383425 | 28692.5 |
| 23s ribosomal rna methyltransferase erm | DW935_14635 | Not Available | Negative | 3383808 - 3384608 | 30286.1 |
| duf1266 domain-containing protein | DW935_14645 | Not Available | Negative | 3384980 - 3385717 | 28206.4 |
| mobilization protein | DW935_14650 | Not Available | Negative | 3386053 - 3387420 | 52532.8 |
| hypothetical protein | DW935_14655 | Not Available | Negative | 3387677 - 3388009 | 12670.4 |
| hypothetical protein | DW935_14660 | Not Available | Negative | 3388006 - 3388398 | 14562.8 |
| site-specific integrase | DW935_14665 | Not Available | Negative | 3388416 - 3389648 | 47185.2 |
| hypothetical protein | DW935_14670 | Not Available | Negative | 3389973 - 3391133 | 43407.2 |
| pectate lyase | DW935_14675 | Not Available | Negative | 3391154 - 3392767 | 61361.3 |
| cupin domain-containing protein | DW935_14680 | Not Available | Positive | 3392956 - 3393447 | 18182.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

