Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein mrec | DW935_14575 | Not Available | Negative | 3364647 - 3365495 | 31395.4 |
| rod shape-determining protein | DW935_14580 | Not Available | Negative | 3365601 - 3366623 | 36937.0 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase purh | DW935_14585 | Not Available | Negative | 3366736 - 3368259 | 56236.2 |
| inorganic phosphate transporter | DW935_14590 | Not Available | Positive | 3368540 - 3370792 | 83841.5 |
| aminoglycoside phosphotransferase | DW935_14595 | Not Available | Positive | 3370900 - 3371982 | 41565.0 |
| s9 family peptidase | DW935_14600 | Not Available | Negative | 3372068 - 3374509 | 94234.0 |
| hypothetical protein | DW935_14605 | Not Available | Negative | 3374619 - 3375353 | 27025.3 |
| hybrid sensor histidine kinase/response regulator | DW935_14610 | Not Available | Negative | 3375549 - 3379949 | 169152.0 |
| pectin esterase | DW935_14615 | Not Available | Negative | 3380144 - 3381871 | 64186.7 |
| duf4948 domain-containing protein | DW935_14625 | Not Available | Negative | 3382097 - 3382678 | 22037.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

