Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys | Not Available | Not Available | Positive | 3353851 - 3353926 | Not Available |
| hypothetical protein | DW935_14530 | Not Available | Negative | 3354565 - 3354660 | 3305.9 |
| cardiolipin synthase | DW935_14535 | Not Available | Positive | 3355029 - 3356324 | 49710.2 |
| methylenetetrahydrofolate reductase | DW935_14540 | Not Available | Positive | 3356680 - 3357633 | 36211.4 |
| dna polymerase iii subunit delta | DW935_14545 | Not Available | Positive | 3357661 - 3358785 | 43533.9 |
| hypothetical protein | DW935_14550 | Not Available | Positive | 3358875 - 3360389 | 57726.9 |
| gliding motility lipoprotein gldh | DW935_14555 | Not Available | Positive | 3360352 - 3360849 | 18792.5 |
| rod shape-determining protein roda | DW935_14560 | Not Available | Negative | 3360853 - 3362307 | 54268.6 |
| penicillin-binding protein 2 | DW935_14565 | Not Available | Negative | 3362288 - 3364138 | 69195.5 |
| rod shape-determining protein mred | DW935_14570 | Not Available | Negative | 3364138 - 3364638 | 18956.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

