Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_14415 | Not Available | Negative | 3336008 - 3336322 | 12187.8 |
| hypothetical protein | DW935_14420 | Not Available | Positive | 3336303 - 3336494 | 7518.47 |
| hypothetical protein | DW935_14425 | Not Available | Positive | 3336510 - 3336716 | 7806.67 |
| hypothetical protein | DW935_14435 | Not Available | Positive | 3336924 - 3337397 | 18362.6 |
| methylated-dna--[protein]-cysteine s-methyltransferase | DW935_14440 | Not Available | Negative | 3337347 - 3337700 | 13314.9 |
| nitrous oxide-stimulated promoter family protein | DW935_14445 | Not Available | Negative | 3337706 - 3337999 | 11961.9 |
| maoc family dehydratase | DW935_14450 | Not Available | Positive | 3338097 - 3338561 | 17703.5 |
| gnat family n-acetyltransferase | DW935_14455 | Not Available | Negative | 3338752 - 3339693 | 36081.8 |
| sdr family oxidoreductase | DW935_14460 | Not Available | Negative | 3339736 - 3340611 | 33000.3 |
| gtra family protein | DW935_14465 | Not Available | Negative | 3340628 - 3341017 | 14958.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

