Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylsulfatase | DW935_14360 | Not Available | Negative | 3317169 - 3318686 | 57835.4 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | DW935_14370 | Not Available | Negative | 3318902 - 3322447 | 129333.0 |
| atp-binding protein | DW935_14375 | Not Available | Negative | 3322490 - 3323668 | 46146.3 |
| hypothetical protein | DW935_14380 | Not Available | Positive | 3323771 - 3324982 | 45652.1 |
| tolc family protein | DW935_14385 | Not Available | Negative | 3325021 - 3326394 | 51796.1 |
| multidrug efflux rnd transporter permease subunit | DW935_14390 | Not Available | Negative | 3326416 - 3329517 | 113097.0 |
| efflux rnd transporter periplasmic adaptor subunit | DW935_14395 | Not Available | Negative | 3329584 - 3330783 | 44405.6 |
| trkh family potassium uptake protein | DW935_14400 | Not Available | Positive | 3331276 - 3332784 | 56402.7 |
| mate family efflux transporter | DW935_14405 | Not Available | Positive | 3332910 - 3334271 | 49516.6 |
| rna pseudouridine synthase | DW935_14410 | Not Available | Negative | 3334338 - 3335960 | 62159.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

