Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | DW935_14300 | Not Available | Positive | 3303950 - 3306001 | 79999.5 |
| dna-binding response regulator | DW935_14305 | Not Available | Positive | 3306129 - 3306893 | 29733.4 |
| hypothetical protein | DW935_14315 | Not Available | Positive | 3308875 - 3309369 | 18008.1 |
| hypothetical protein | DW935_14320 | Not Available | Positive | 3309520 - 3310005 | 18259.8 |
| hypothetical protein | DW935_14325 | Not Available | Positive | 3310018 - 3310968 | 35102.2 |
| hypothetical protein | DW935_14330 | Not Available | Positive | 3310976 - 3311911 | 34587.1 |
| wg repeat-containing protein | DW935_14335 | Not Available | Positive | 3311923 - 3313770 | 68564.8 |
| hypothetical protein | DW935_14340 | Not Available | Positive | 3313789 - 3315000 | 45862.6 |
| hypothetical protein | DW935_14345 | Not Available | Positive | 3315428 - 3315670 | 8929.99 |
| port family protein | DW935_14350 | Not Available | Positive | 3315686 - 3316462 | 29061.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

