Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_14250 | Not Available | Negative | 3292659 - 3293141 | 17559.9 |
| ecf transporter s component | DW935_14255 | Not Available | Positive | 3293275 - 3293784 | 18481.4 |
| twin-arginine translocase tata/tate family subunit | DW935_14260 | Not Available | Positive | 3293932 - 3294135 | 7276.18 |
| twin-arginine translocase subunit tatc | DW935_14265 | Not Available | Positive | 3294142 - 3294972 | 32372.7 |
| alanine dehydrogenase | DW935_14270 | Not Available | Negative | 3295059 - 3296150 | 38998.8 |
| m23 family peptidase | DW935_14275 | Not Available | Positive | 3296344 - 3298014 | 62671.9 |
| dipeptidase | DW935_14280 | Not Available | Positive | 3298057 - 3299697 | 61188.6 |
| phospho-sugar mutase | DW935_14285 | Not Available | Positive | 3300011 - 3301756 | 64726.5 |
| eama family transporter | DW935_14290 | Not Available | Positive | 3301939 - 3302859 | 34775.9 |
| aldose 1-epimerase family protein | DW935_14295 | Not Available | Negative | 3302908 - 3303783 | 33987.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

