Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription antitermination factor nusb | DW935_14195 | Not Available | Positive | 3281192 - 3282118 | 36291.4 |
| preprotein translocase subunit yajc | DW935_14200 | Not Available | Positive | 3282175 - 3282489 | 11609.3 |
| ybbr-like domain-containing protein | DW935_14205 | Not Available | Positive | 3282503 - 3283516 | 39038.4 |
| dephospho-coa kinase | DW935_14210 | Not Available | Positive | 3283509 - 3284105 | 22355.1 |
| hypothetical protein | DW935_14215 | Not Available | Positive | 3284172 - 3284612 | 16049.2 |
| atp-dependent chaperone clpb | DW935_14225 | Not Available | Negative | 3285772 - 3288360 | 97163.7 |
| hypothetical protein | DW935_14230 | Not Available | Positive | 3288635 - 3289216 | 21484.8 |
| lysr family transcriptional regulator | DW935_14235 | Not Available | Positive | 3289229 - 3290125 | 34367.8 |
| putative sulfate exporter family transporter | DW935_14240 | Not Available | Positive | 3290214 - 3291200 | 35078.0 |
| duf4010 domain-containing protein | DW935_14245 | Not Available | Negative | 3291292 - 3292581 | 48246.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

