Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fluoride efflux transporter crcb | DW935_14145 | Not Available | Negative | 3271487 - 3271852 | 13272.6 |
| amidophosphoribosyltransferase | DW935_14150 | Not Available | Positive | 3271951 - 3273357 | 51992.8 |
| peptidase t | DW935_14155 | Not Available | Positive | 3273465 - 3274685 | 45287.2 |
| glycine cleavage system aminomethyltransferase gcvt | DW935_14160 | Not Available | Positive | 3274721 - 3275806 | 39665.6 |
| sodium:proton antiporter | DW935_14165 | Not Available | Positive | 3276012 - 3278279 | 84385.5 |
| hit family protein | DW935_14170 | Not Available | Positive | 3278304 - 3278729 | 16329.5 |
| rna-binding s4 domain-containing protein | DW935_14175 | Not Available | Negative | 3278820 - 3279248 | 16437.7 |
| aminoacyl-trna hydrolase | DW935_14180 | Not Available | Negative | 3279248 - 3279811 | 20618.0 |
| 50s ribosomal protein l25 | DW935_14185 | Not Available | Negative | 3279836 - 3280432 | 21429.4 |
| duf3276 family protein | DW935_14190 | Not Available | Negative | 3280613 - 3280996 | 14786.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

