Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptide peptidase sppa | DW935_14095 | Not Available | Negative | 3255461 - 3257242 | 65880.9 |
| nitroreductase family protein | DW935_14100 | Not Available | Positive | 3257377 - 3257982 | 23172.8 |
| bifunctional fucokinase/l-fucose-1-p-guanylyltransferase | DW935_14105 | Not Available | Positive | 3258056 - 3260896 | 105133.0 |
| glycerate kinase | DW935_14110 | Not Available | Negative | 3260883 - 3262022 | 39758.5 |
| hypothetical protein | DW935_14115 | Not Available | Negative | 3262243 - 3262440 | 7826.26 |
| type ii pantothenate kinase | DW935_14120 | Not Available | Negative | 3262791 - 3263615 | 29299.7 |
| 9-o-acetylesterase | DW935_14125 | Not Available | Negative | 3263693 - 3265609 | 72644.5 |
| pap2 family protein | DW935_14130 | Not Available | Negative | 3265647 - 3266264 | 23044.7 |
| response regulator | DW935_14135 | Not Available | Negative | 3266371 - 3270360 | 152142.0 |
| hypothetical protein | DW935_14140 | Not Available | Positive | 3270657 - 3271412 | 28200.2 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

