Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_13935 | Not Available | Positive | 3226832 - 3227035 | 7728.4 |
| duf2075 domain-containing protein | DW935_13940 | Not Available | Negative | 3227198 - 3228679 | 58065.6 |
| winged helix-turn-helix transcriptional regulator | DW935_13945 | Not Available | Negative | 3228735 - 3230111 | 51606.6 |
| arac family transcriptional regulator | DW935_13950 | Not Available | Negative | 3230189 - 3231028 | 32960.8 |
| sugar o-acetyltransferase | DW935_13955 | Not Available | Positive | 3231139 - 3231735 | 21793.6 |
| had family hydrolase | DW935_13960 | Not Available | Positive | 3231740 - 3232378 | 23851.1 |
| hypothetical protein | DW935_13970 | Not Available | Negative | 3232844 - 3233035 | 7293.26 |
| atp-binding protein | DW935_13975 | Not Available | Positive | 3233458 - 3234801 | 52396.1 |
| hypothetical protein | DW935_13980 | Not Available | Negative | 3237096 - 3237335 | 9465.28 |
| sigma-54-dependent fis family transcriptional regulator | DW935_13985 | Not Available | Negative | 3237540 - 3238862 | 49744.3 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

