Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_13880 | Not Available | Positive | 3217424 - 3217609 | 7202.1 |
| cyth domain-containing protein | DW935_13885 | Not Available | Positive | 3217680 - 3218150 | 18287.6 |
| tonb-dependent receptor | DW935_13890 | Not Available | Positive | 3218240 - 3220714 | 91585.5 |
| rna polymerase sigma factor | DW935_13895 | Not Available | Positive | 3220883 - 3221386 | 19779.6 |
| hypothetical protein | DW935_13900 | Not Available | Negative | 3221467 - 3221853 | 14818.4 |
| sodium-dependent transporter | DW935_13905 | Not Available | Positive | 3221949 - 3223313 | 49207.4 |
| helix-hairpin-helix domain-containing protein | DW935_13910 | Not Available | Positive | 3223321 - 3224223 | 35330.7 |
| alkaline phosphatase | DW935_13915 | Not Available | Negative | 3224220 - 3225638 | 51615.1 |
| hypothetical protein | DW935_13920 | Not Available | Positive | 3225731 - 3225925 | 7532.48 |
| hypothetical protein | DW935_13925 | Not Available | Positive | 3225942 - 3226442 | 19273.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

