Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_13830 | Not Available | Positive | 3206115 - 3206237 | 4315.07 |
| arac family transcriptional regulator | DW935_13835 | Not Available | Positive | 3206780 - 3207268 | 18915.8 |
| hypothetical protein | DW935_13840 | Not Available | Positive | 3207346 - 3210153 | 104134.0 |
| hypothetical protein | DW935_13845 | Not Available | Positive | 3210292 - 3210948 | 25861.1 |
| nudix domain-containing protein | DW935_13850 | Not Available | Positive | 3210899 - 3211789 | 34200.9 |
| nad-dependent epimerase/dehydratase family protein | DW935_13855 | Not Available | Positive | 3211797 - 3212639 | 31290.1 |
| hypothetical protein | DW935_13860 | Not Available | Positive | 3212746 - 3213123 | 14077.9 |
| m20/m25/m40 family metallo-hydrolase | DW935_13865 | Not Available | Negative | 3213129 - 3214193 | 39103.8 |
| long-chain fatty acid--coa ligase | DW935_13870 | Not Available | Positive | 3214407 - 3216212 | 68368.2 |
| peptide chain release factor 2 | DW935_13875 | Not Available | Positive | 3216270 - 3217385 | 42519.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

