Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_13780 | Not Available | Positive | 3194707 - 3195330 | 24607.8 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | DW935_13785 | Not Available | Positive | 3195339 - 3195902 | 21334.7 |
| duf2795 domain-containing protein | DW935_13790 | Not Available | Positive | 3195974 - 3196195 | 8716.91 |
| porin family protein | DW935_13795 | Not Available | Positive | 3196359 - 3196958 | 21550.2 |
| primosomal protein n' | DW935_13800 | Not Available | Positive | 3197031 - 3199493 | 93875.1 |
| phosphatase | DW935_13805 | Not Available | Positive | 3199541 - 3200251 | 26532.1 |
| low molecular weight phosphotyrosine protein phosphatase | DW935_13810 | Not Available | Positive | 3200259 - 3200729 | 17874.5 |
| hdig domain-containing protein | DW935_13815 | Not Available | Negative | 3200704 - 3202761 | 79191.8 |
| glutamate--trna ligase | DW935_13820 | Not Available | Positive | 3202843 - 3204360 | 57877.2 |
| 3-deoxy-d-manno-octulosonic acid transferase | DW935_13825 | Not Available | Positive | 3204373 - 3205593 | 46820.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

