Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DW935_13720 | Not Available | Positive | 3181371 - 3183677 | 86200.5 |
| hypothetical protein | DW935_13725 | Not Available | Positive | 3183681 - 3184031 | 13439.4 |
| luxr family transcriptional regulator | DW935_13730 | Not Available | Negative | 3183972 - 3184736 | 29423.2 |
| b12-binding domain-containing radical sam protein | DW935_13735 | Not Available | Negative | 3185595 - 3187232 | 62730.8 |
| n-acetyltransferase | DW935_13740 | Not Available | Negative | 3187248 - 3187769 | 20094.9 |
| gnat family n-acetyltransferase | DW935_13745 | Not Available | Negative | 3187787 - 3188218 | 16235.8 |
| n-acetyltransferase | DW935_13750 | Not Available | Positive | 3188323 - 3188808 | 18685.6 |
| duf488 family protein | DW935_13755 | Not Available | Positive | 3188882 - 3189238 | 14232.9 |
| acyl-coa carboxylase subunit beta | DW935_13770 | Not Available | Positive | 3191629 - 3193161 | 55881.1 |
| aminopeptidase | DW935_13775 | Not Available | Negative | 3193292 - 3194602 | 50768.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

