Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DW935_13620 | Not Available | Positive | 3162860 - 3165163 | 85933.2 |
| methylenetetrahydrofolate reductase | DW935_13625 | Not Available | Positive | 3165460 - 3166413 | 35891.0 |
| ribonucleotide-diphosphate reductase subunit beta | DW935_13630 | Not Available | Negative | 3166504 - 3167553 | 41348.8 |
| ribonucleoside-diphosphate reductase subunit alpha | DW935_13635 | Not Available | Negative | 3167716 - 3170235 | 95735.6 |
| hypothetical protein | DW935_13640 | Not Available | Negative | 3170638 - 3170847 | 7700.39 |
| hypothetical protein | DW935_13645 | Not Available | Negative | 3170874 - 3171431 | 21451.8 |
| putative transporter | DW935_13650 | Not Available | Negative | 3171451 - 3173139 | 60888.9 |
| acyl-coa carboxylase subunit beta | DW935_13655 | Not Available | Negative | 3173265 - 3174578 | 47569.0 |
| dde transposase | DW935_13660 | Not Available | Negative | 3174579 - 3174694 | 4678.52 |
| hypothetical protein | DW935_13665 | Not Available | Negative | 3174753 - 3175091 | 13415.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

