Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional cobalt-precorrin-7 (c(5))-methyltransferase/cobalt-precorrin-6b (c(15))-methyltransferase | DW935_13570 | Not Available | Negative | 3150001 - 3151182 | 44294.9 |
| precorrin-3b c(17)-methyltransferase | DW935_13575 | Not Available | Negative | 3151187 - 3152593 | 51850.8 |
| flavin reductase family protein | DW935_13580 | Not Available | Negative | 3153273 - 3153833 | 20258.3 |
| flavodoxin | DW935_13585 | Not Available | Negative | 3153839 - 3154375 | 19869.9 |
| arac family transcriptional regulator | DW935_13590 | Not Available | Positive | 3154701 - 3155609 | 35396.4 |
| arac family transcriptional regulator | DW935_13595 | Not Available | Positive | 3155641 - 3156528 | 34126.2 |
| 1-deoxy-d-xylulose-5-phosphate synthase | DW935_13600 | Not Available | Positive | 3156715 - 3158475 | 64582.7 |
| abc transporter substrate-binding protein | DW935_13605 | Not Available | Negative | 3158583 - 3159740 | 43483.4 |
| tonb-dependent receptor | DW935_13610 | Not Available | Negative | 3159754 - 3161931 | 81195.4 |
| hypothetical protein | DW935_13615 | Not Available | Positive | 3162371 - 3162751 | 13871.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

