Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_13465 | Not Available | Positive | 3129588 - 3129911 | 12222.7 |
| rna methyltransferase | DW935_13470 | Not Available | Negative | 3129983 - 3130738 | 27943.9 |
| hypothetical protein | DW935_13475 | Not Available | Positive | 3130840 - 3133164 | 88990.3 |
| hypothetical protein | DW935_13485 | Not Available | Positive | 3133483 - 3134067 | 21939.4 |
| hypothetical protein | DW935_13490 | Not Available | Positive | 3134529 - 3134747 | 8572.49 |
| Trna-lys | Not Available | Not Available | Positive | 3134878 - 3134953 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 3134971 - 3135046 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 3135068 - 3135143 | Not Available |
| mbl fold metallo-hydrolase | DW935_13510 | Not Available | Negative | 3135232 - 3136035 | 29900.9 |
| winged helix family transcriptional regulator | DW935_13515 | Not Available | Negative | 3136189 - 3137151 | 37589.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

