Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW935_13250 | Not Available | Positive | 3084858 - 3085244 | 15088.7 |
| peptidase m15 | DW935_13255 | Not Available | Positive | 3085241 - 3085639 | 15104.0 |
| hypothetical protein | DW935_13260 | Not Available | Positive | 3085643 - 3086164 | 19529.6 |
| hypothetical protein | DW935_13265 | Not Available | Positive | 3086269 - 3086514 | 9427.4 |
| integrase | DW935_13270 | Not Available | Negative | 3086527 - 3087768 | 48246.4 |
| Trna-ala | Not Available | Not Available | Positive | 3087931 - 3088004 | Not Available |
| duf4286 family protein | DW935_13280 | Not Available | Positive | 3088067 - 3088372 | 11925.3 |
| crossover junction endodeoxyribonuclease ruvc | DW935_13285 | Not Available | Positive | 3088369 - 3088938 | 21117.3 |
| type i pullulanase | DW935_13290 | Not Available | Positive | 3088943 - 3090937 | 74625.4 |
| mannonate dehydratase | DW935_13295 | Not Available | Positive | 3090995 - 3092173 | 44763.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

