Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM43-4BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1506264 bp
Thymine Count
1483148 bp
Guanine Count
1054015 bp
Cytosine Count
1111250 bp
Genome Length
5155765 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DW935_13200 | Not Available | Negative | 3072691 - 3075000 | 86322.5 |
| m3 family peptidase | DW935_13205 | Not Available | Positive | 3075322 - 3077427 | 79163.9 |
| acyltransferase | DW935_13210 | Not Available | Positive | 3077608 - 3078768 | 44329.1 |
| hypothetical protein | DW935_13215 | Not Available | Negative | 3078875 - 3079729 | 31766.9 |
| hypothetical protein | DW935_13220 | Not Available | Positive | 3079736 - 3079966 | 9075.28 |
| glycosyltransferase | DW935_13225 | Not Available | Negative | 3079870 - 3080583 | 27692.8 |
| glycosyltransferase family 1 protein | DW935_13230 | Not Available | Negative | 3080592 - 3081686 | 41358.6 |
| glycosyl transferase | DW935_13235 | Not Available | Negative | 3081688 - 3083601 | 74893.3 |
| site-specific integrase | DW935_13240 | Not Available | Positive | 3083620 - 3084575 | 36631.4 |
| hypothetical protein | DW935_13245 | Not Available | Negative | 3084559 - 3084762 | 7846.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

